Applied Population Ecology Lab
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Publications

​2024

105. Grant, E.H.C., J. Fleming, E. Bastiaans, A.B. Brand, J.L. Brooks, C. Devlin, K. Epp, M. Evans, M.C. Fisher-Reid, B. Gratwicke, K.L. Grayson, N.T. Haydt, R. Hernandez-Pacheco, D.J. Hocking, A. Hyde, M. osito, M.G. MacKnight, T.J.H. Matlaga, L. Mead, D.J. Muñoz, W. Peterman, V. Puza, C. Shafer, S.C. Sterrett, C. Sutherland, L.M. Thompson, A.R. Warwick, A.D. Wright, K. Yurewicz, and D.A.W. Miller. 2024. Range-wide salamander densities reveal a key component of terrestrial biomass in easter North American forests. Biology Letters 20:20240033. 

104. Dinsmore, C.R., A.M. Bronikowski, A.M. Sparkman, D.J. Mu
ñoz, C.L. Davis, J. Avery, S.J. Arnold, and D.A.W. Miller. 2024. Princes and Paupers: Effects of annual and early-life resource variability on demography in populations of common garter snakes, Thamnophis sirtalis. Journal of Herpetology 58:118817.

103. Werba, J., D.A.W. Miller, A.B. Brand, and E.H.C. Grant. 2024. Updated range map of an endangered salamander and congeneric competitor reveals different niche preferences. Ecology and Evolution 14:e11262.

102. Van Wilgenburg, S., D.A.W. Miller, D.T. Iles, S. Hache, C.M. Frances, D.D. Hope, J.D. Toms, and K.L. Drake. 2024. Evaluating trade-offs in spatial versus temporal replication when estimating avian community composition and predicting species distributions. Avian Conservation and Ecology 19:11

101. Sankararaman, V., and D.A.W. Miller. 2024.
Life-history traits govern the habitat use of diverse amphibian assemblages in an agroforest landscape matrix. Animal Conservation 27:86-97.

2023

100. Amaral, B.R., A.M. Wilson, J. Blum, and D.A.W. Miller. 2023. Quantifying regional-scale impacts of hemlock woolly adelgid invasion on North American forest bird communities. Biological Invasions ​25:4009-4025.

99. Tornabene, B.J., B.R. Hossack, B.J. Halstead, C.A. Eagles-Smith, M.J. Adams, A.R. Backlin, A.B. Brand, C.S. Emery, R.N. Fisher, J. Fleming, B.M. Glorioso, D.A. Grear, E.H. Campbell Grant, P.M. Kleeman, D.A.W. Miller, E. Mouths, C.A. Pearl, J.C. Rowe, C.T. Rumrill, J.H. Waddle, M.E. Winzeler, and K.L. Smelling. 2023. Broad-scale assessment of methylmercury in adult amphibians. Environmental Science & Technology 57:17511-17521.

98. Quinlan, G.M., D.A.W. Miller, and C.M. Grozinger. 2023. Examining spatial and temporal drivers of pollinator nutritional resources: evidence from five decades of honey bee colony productivity data. Environmental Research Letters 18:114018.

97. Youngflesh, C., G.A. Montgomery, J.F. Saracco, D.A.W. Miller, R.P. Guralnick, A.H. Hurlbert, R.B. Siegel, R. LaFrance, and M.W. Tingley. 2023. Demographic consequences of phenological asynchrony for North American songbirds. Proceedings of the National Academy of Sciences 120:e2221961120.

96. Davis, C.L., S.C. Walls, W.J. Barichivich, M.E. Brown, and D.A.W. Miller. 2023. Disentangling direct and indirect effects of extreme events on coastal wetland communities. Journal of Animal Ecology 92:1135-1148.​

95. Davis, C.L., D.J. Muñoz, S.M. Amburgey, C.R. Dinsmore, E.W. Teitsworth, and D.A.W. Miller. 2023. Multistate model to estimate sex-specific dispersal rates and distances for a wetland-breeding amphibian population. Ecosphere 14:e4345.

​94. DiRenzo, G.V., E. Hanks, and D.A.W. Miller. 2023. A practical guide to understanding and validating complex models using data simulations. Methods in Ecology and Evolution 14:203-217.

​2022

93. Mahony, N.A., B.C. Dale, and D.A.W. Miller. 2022. Grassland bird population declines at three Breeding Bird Survey spatial scales in contrast to a large native prairie. Ecosphere 13:e4309

92. Reinke, E.A., H. Cayuela, 111 additional co-authors, A.M. Bronikowski, and D.A.W. Miller. 2022. Diverse aging rates in ectothermic tetrapods provide insights for the evolution of aging and longevity. Science 376:1459-1466.

91. Direnzo, G.V., D.A.W. Miller, and E.H.C. Grant. 2022. Ignoring species availability biases occupancy estimates in single-scale occupancy models. Methods in Ecology and Evolution 13:1790-1804.

90. Mu
ñoz, D., D.A.W. Miller, R. Schilder,n and E.H.C. Grant. 2022. Geographic variation and thermal plasticity shape salamander metabolic rates under current and future climates. Ecology and Evolution e8433

89. Holden, K.G., E.J. Gangloff, D.A.W. Miller, A.R. Hedrick, C. Dinsmore, A. BAsel, G. Kutz, and A.M. Bronikowski. 2022. Over a decade of field physiology reveals life-history specific strategies to drought in garter snakes (Thamnophis elegans). Proceedings of the Royal Society B 289:20212187.

88. Snyder, R., E. Mausteller, T.J. Hawley Matlaga, and D.A.W. Miller. 2022. How does landscape permeability affect the movement of eastern red-backed salamanders? Journal of Wildlife Management 86:e22132

87. Bronikowski, A.M., B.A. Reinke, L. Hoekstra, F.J. Janzen, and D.A.W. Miller. 2022. Joint estimation of growth and survival from mark-recapture data to improve estimates of senescence in wild populations: Reply. Ecology 103:e03571.


86. Cayuela, H. ,J.-F. Lemaître, J.-P. Léna, V. Ronget, I. Martínez-Solano, E. Muths, D.S. Pilliod, B.R. Schmidt, G. Sánchez-Montes, J. Gutiérrez-Rodríguez, G. Pyke, K. Grossenbacher, O. Lenzi, J. Bosch, K.H. Beard, L.L. Woolbright, B.A. Lambert, D.M. Green, N. Jreidini, J.M. Garwood, R.N. Fisher, K. Matthews, D. Dudgeon, A. Lau, J. Speybroeck, R. Homan, R. Jehle, E. Başkale, E. Mori, J.W. Arntzen, P. Joly, R.M. Stiles, M.J. Lannoo, J.C. Maerz, W.H. Lowe, A. Valenzuela-Sánchez, D.G. Christiansen, C. Angelini, J.-M. Thirion, J. Merilä, G.R. Colli, M.M. Vasconcellos, T.C.V. Boas, Í.C. Arantes, P. Levionnois, B.A. Reinke, C. Vieira, G.A..B. Marais, J.-M. Gaillard, D.A.W. Miller. 2022. Sex-related differences in aging rate are associated with sex chromosome system in amphibians. Evolution 76:346-356.

85. Pillay, R., D.A.W. Miller, R. Raghunath, A.A. Joshi, C. Mishra, A.J.T. Johnsingh, and M.D. Madhusudan. 2022. Using interview surveys and multispecies occupancy models to inform vertebrate conservation. Conservation Biology 36:e13832.

2021

84. Sankararaman, V., S. Dalvi, D.A.W. Miller, and K.K. Karanth. 2021. Local and landscape characteristics shape amphibian communities across production landscapes in the Western Ghats. Ecological Solutions and Evidence 2:e12110

83. Zulian, V, D.A.W. Miller, and G. Ferraz. 2021. Integrating citizen-science and planned-survey data improves species distribution estimates. Diversity and Distributions 27:2498-2509.

82. Zulian, V., D.A.W. Miller, and G. Ferraz. 2021. Endemic and threatened Amazona parrots of the Atlantic Forest: an overview of their geographic ranges and population size. Diversity 13:416

81. Murphy, A..J., D.R. Diefenbach, M. Ternent, M. Lavallo, and D.A.W. Miller. 2021. Threading the needle: how humans influence predator-prey spatiotemporal interactions in a multiple-predator system. Journal of Animal Ecology ​90:2377-2390.

80. Direnzo, G.V., D.A.W. Miller, B.R. Hossack, B.H. Sigafus, P.E. Howell, E. Muths, and E.H.C. Grant. 2021. Accommodating the role of site memory in dynamic species distribution models. Ecology 102:e03315.
79. Youngflesh, C., J. Socolar, B.R. Amaral, A. Arab, R.P. Guralnick, A.H. Hurlbert, R. LaFrance, S.J. Mayor, D.A.W. Miller, and M.W. Tingley. 2021. Migratory strategy drives species-level variation in bird sensitivity to vegetation green-up. Nature Ecology and Evolution 5:987-994. 

​78. Combrink, L.L., A.M. Bronikowski, D.A.W. Miller, and A.M.Sparkman. 2021. 
Current and time-lagged effects of climate on innate immunity in two sympatric snake species. Ecology and Evolution 11:3239-3250.

77. Amburgey, S.M., D.A.W. Miller, C.J. Rochester, K.S. Delaney, S.P.D. Riley, C.S. Brehme, S.A. Hathaway, and R.N. Fisher. 2021. 
The influence of species life history and distribution characteristics on species responses to habitat fragmentation in an urban landscape. Journal of Animal Ecology 90:685-697.

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76. King, T.W., C. Vynne, D.A.W. Miller, S. Fisher, S. Fitkin, J. Rohrer, J.I. Ransom, D.H. Thornton. 2021. The influence of spatial and temporal scale on the relative importance of biotic vs. abiotic factors for species distributions. Diversity and Distributions 27: 327-343.
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2020

75. Grant, E.H.C., D.A.W. Miller, and E. Muths. 2020. A synthesis of evidence of drivers of amphibian decline. Herpetologica 76:101-107.

74. Muñoz, D.J.  and D.A.W. Miller, 2020. Human-dominated land cover corresponds to spatial variation in Mourning Dove (Zenaida macroura) reproductive output across the United States. Condor duaa003.

73. . King, T.W., C. Vynne, D.A.W. Miller, S. Fisher, S. Fitkin, J. Rohrer, J.I. Ransom, and D. Thornton. 2020. Will Lynx Lose Their Edge? Canada Lynx Occupancy in Washington. Journal of Wildlife Management 84:705-725.

72. . Amburgey, S.A. D.A.W. Miller, A. Brand, A.E. Dietrich, and E.H.C Grant 2020. Factors Facilitating Co-occurrence at the Range Boundary of Shenandoah and Red-backed Salamanders. Journal of Herpetology 54: 125-135
71. Mosher, B.A., R.F. Bernard, J.M. Lorch, D.A.W. Miller, K.L.D. Richgels, C.L. White, and E.H.C. Grant. 2020. Successful molecular detection studies require clear communication among diverse research partners. Frontiers in Ecology and the Environment 18:43-51.

70. Hoekstra, L.A., T.S. Schwartz, A.M. Sparkman, D.A.W. Miller, A.M. Bronikowski. 2020. 
The untapped potential of reptile biodiversity for understanding how and why animals age. Functional Ecology 34:38-54.
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69. Reinke, B.A. L. Hoekstra, A.M. Bronikowski, F.J. Janzen, and D.A.W Miller.  2020. Joint estimation of growth and survival from mark-recapture data to improve estimates of senescence in wild populations. Ecology  e02877

2019

68. Rafiq, K., C.M. Bryce, L.N. Rich, C. Coco, D.A.W. Miller, C. Meloro, S.A. Wich, J.W. McNutt, M.W. Hayward. 2019. Tourist photographs as a scalable framework for wildlife monitoring in protected areas. Current Biology 29:R681-R682


67. Reinke, B.A., D.A.W Miller, F.J. Janzen. 2019. What Have Long-Term Field Studies Taught Us About Population Dynamics?
Annual Review of Ecology, Evolution, and Systematics 50:261-278.
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66. Amburgey, S.M., D.A.W. Miller, A. Brand, A. Dietrich, and E.H.C. Grant. 2019. Knowing your limits: estimating range boundaries and co-occurrence zones for two competing plethodontid salamanders. Ecosphere 10:e02727.

65. Pacifici, K., B.J. Reich, D.A.W. Miller, and B.S. Pease. Accepted. Resolving misaligned data with integrated species distribution models. Ecology 100:e02709
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64. Mosher, B.A., A.B. Brand, A.N.M. Wiewel, D.A.W. Miller, M.J. Gray, D.L. Miller, E.H.C. Grant. 2019. Estimating occurrence, prevalence, and detection of amphibian pathogens: insights from occupancy models. Journal of Wildlife Diseases 55:563-575.

63. Davis, C.L., D.A.W. Miller, E.H.C. Grant, B.J. Halstead, P.M. Kleeman, S.C. Walls, and W.J. Barichivich. 2019. Linking variability in climate to wetland habitat suitability: is it possible to forecast regional responses from simple climate measures? Wetland Ecology and Management​ 27:39-53.


62. Rich, L.N., D.A.W. Miller, D.J. Muñoz, H.S. Robinson, J.W. McNutt, and M.J. Kelly. Sampling design and analytical advances for simultaneous density estimation of seven sympatric canivore species from camera trap data. Biological Conservation 233:12-20.

61. Colchero, F., O.R. Jones, D.A. Conde, D. Hodgson, F. Zajitschek, B.R. Schmidt, A.F. Malo, S.C. Alberts, P.H. Becker, S. Bouwhuis, A.M. Bronikowski, K.M De Vleeschouwer, R.J. Delahay, S. Dummermuth, E. Fernández‐Duque, J. Frisenvænge, M. Hesselsøe, S. Larson, J.‐F. Lemaître, J. McDonald, D.A.W. Miller, C. O'Donnell, C. Packer, B.E. Raboy, C.J. Reading, E. Wapstra, H. Weimerskirch, G.M. While, A. Baudisch, T. Flatt, T. Coulson, and J.‐M. Gaillard. The diversity of population responses to environmental change. Ecology Letters 22:342-353.

60. Miller, D.A.W., K. Pacifici, J.S. Sanderlin, and B.J. Reich. 2019. The recent past and promising future for data integration methods to estimate species' distributions. Methods in Ecology and Evolution 10:22-37.

59. Louvrier, J. A. Molinari-Jobin, M. Kéry, T. Chambert, D.A.W. Miller, F. Zimmermann, E. Marboutin, P. Molinari, O. Müeller, R. Černe, O. Gimenez. 2019. Use of ambiguous detections to improve estimates from species distribution models. Conservation Biology 33:185-195.

2018

58.  Miller, D.A.W, E.H.C. Grant, E. Muths, S.M. Amburgey, M.J. Adams, M.B. Joseph, J. H. Waddle, P.T.J. Johnson, M.E. Ryan, B.R. Schmidt, D.L. Calhoun, C.L. Davis, R.N. Fisher, D.M. Green, B.R. Hossack, T.A.G. Rittenhouse, S.C. Walls, L.L. Bailey, S.S. Cruickshank, G.M. Fellers, T.A. Gorman, C.A. Haas, W. Hughson, D.S. Pilliod, S.J. Price, A.M. Ray, W. Sadinski, D. Saenz, W.J. Barichivich, A. Brand, C. S. Brehme, R. Dagit, K.S. Delaney, B.M. Glorioso, L.B. Kats, P.M. Kleeman, C.A. Pearl, C.J. Rochester, S.P.D. Riley, M. Roth, and B.H. Sigafus. 2018. Quantifying climate sensitivity and climate driven change in North American amphibian communities. Nature Communications 9:3926.

57. Davis, C.L., L.N. Rich, Z.J. Farris, M.J. Kelly, M.S. Di Bitetti, Y. Di Blanco, S. Albanesi, M.S. Farhadinia, N. Gholikhani, S. Hamel, B.J. Harmsen, C. Wultsch, M.D.. Kane, Q. Martins, A.J. Murphy, R. Steenweg, S. Sunarto, A. Taktehrani, K. Thapa, J.M. Tucker, J. Whittington, F.A. Widodo, N.G. Yoccoz, and D.A.W. Mille. 2018. Ecological correlates of the spatial co-occurrence of sympatric mammalian carnivores worldwide. Ecology Letters 21:1401-1412.

56. Scully, A.E., S. Fisher, D.A.W. Miller, and D.H. Thornton. 2018. Influence of biotic interactions on the distribution of Canada lynx (Lynx canadensis) at the southern edge of their range. Journal of Mammalogy 99:760-772.
55. Toenies, M, Miller, D.A.W., Marshall, M., and Stauffer, G.E. 2018. Shifts in vegetation and avian community structure following the decline of a foundational forest species, the eastern hemlock. Condor 120:489-506.​
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54. Davis, C.L., E.W. Teitsworth, and D.A.W. Miller. 2018. Combining data sources to understand drivers of spotted salamander (Ambystoma maculatum) population abundance. Journal of Herpetology 52:116-126.

53. Chambert, T., E.H.C. Grant, D.A.W. Miller, J.D. Nichols, K.P. Mulder, and A.B. Brand. 2018. Two-species occupancy modeling accounting for species misidentification and nondetection. Methods in Ecology and Evolution 9:1468-1477.

52. Sparkman, A.M., K.R. Chism, A.M. Bronikowski, L.J,. Brummett, L.L. Combrink, C.L. Davis, K.G. Holden, N.M. Kabey, and D.A.W. Miller. 2018. Use of field-portable ultrasonography reveals differences in developmental phenology and maternal egg provisioning in two sympatric viviparous snakes. Ecology and Evolution 8:3330-3340.

51. Chambert, T., J.H. Waddle, D.A.W. Miller, S.C. Walls, and J.D. Nichols. 2018. A new framework for analyzing automated acoustic species-detection data: occupancy estimation and optimization of recordings post-processing. ​Methods in Ecology and Evolution 9:560-570.​​
​50. Amburgey, S.M., D.A.W. Miller, E.H.C. Grant, T.A.G. Rittenhouse, M.F. Bernard, J.L. Richardson, M.C. Urban, W. Hughson, A.B. Brand, C.J. Davis, C.R. Hardin, P.W.C. Paton, C.J. Raithel, R.A. Relyea, A.F. Scott, D.K. Skelly, D.E. Skidds, C.K. Smith, and E.E. Werner. 2018. Range position and climate sensitivity: the structure of among-population demographic responses to climatic variation. Global Change Biology 24:439-454.
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49. Stauffer, G.E., D.A.W. Miller, L. Williams, and J. Brown. 2018. Ruffed grouse population declines after introduction of West Nile virus. Journal of Wildlife Management 82:165-172.

2017 ​
48. Anotonishak, M., Muñoz, D., and D. Miller. 2017. Using glow sticks to increase funnel trap capture rates for adult vernal pool amphibians. Herpetological Review 48:544-549.
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47. Muths, E., T. Chambert , B.R. Schmidt , D.A.W. Miller, B.R. Hossack , P. Joly , O. Grolet , D.M. Green, D.S. Pilliod, M. Cheylan, R.N. Fisher, R. McCaffery, M.J. Adams, W. Palen , J. Arntzen, J. Garwood, G.M. Fellers, J.-M. Thirion, A. Besnard, and E.H.C. Grant. 2017. Heterogeneous responses of amphibian populations to climate change complicates conservation planning. Scientific Reports 7:17102.

46. Fellers, G.M., P.M. Kleeman, D.A.W. Miller, and B.J. Halstead. 2017. Population trends, survival, and sampling methodologies for a population of Rana draytonii. Journal of Herpetology ​51:567-573
45. Stauffer, G.E., D.A.W. Miller, A.M. Wilson, M. Brittingham,  and D.W. Brauning. 2017. Stewardship responsibility of Pennsylvania public and private lands for songbird conservation. Biological Conservation 213:185-193.

44. Rich, L.N., C.L. Davis, Z.J. Farris, D.A.W. Miller, J. M. Tucker, S. Hamel, M.S. Farhadinia, R. Steenweg , M.S. Di Bitetti, K. Thapa, M.D. Kane, S. Sunarto, N.P. Robinson, A. Paviolo, P. Cruz, Q. Martins, N. Gholikhani, A. Taktehrani, J. Whittington, F.A. Widodo, N. G. Yoccoz, C. Wultsch, B.J. Harmsen, and M.J. Kelly. 2017. 
Assessing global patterns in mammalian carnivore occupancy and richness by integrating local camera trap surveys. Global Ecology and Biogeography 26:918-929.

43. Rich, L.N., D.A.W. Miller, H.S. Robinson, J.W. McNutt, and M.J. Kelly. 2017. Carnivore distributions in Botswana are shaped by resource availability and intraguild species. Journal of Zoology 303:90-98.

42. Davis, C.L., D.A.W. Miller, S.C. Walls, W.J. Barichivich, J.W. Riley, M.E. Brown. 2017. Life history plasticity does not confer resilience to environmental change in the mole salamander (Ambystoma talpoideum). 
Oecologia 183:739-749.
41. Pacifici, K., B.J. Reich, D.A.W. Miller, B. Gardner, G. Stauffer, S. Singh, A. McKerrow, and J.A. Collazo. 2017. Integrating multiple data sources in species distribution modeling: a framework for data fusion. Ecology 98:840-850.

40. Sparkman, A.M., M. Blois, J. Adams, L. Waits, D.A.W. Miller, and D.L. Murray. ​2017. Evidence for sex-specific reproductive senescence in monogamous cooperatively breeding red wolves. Behavioral Ecology and Sociobiology 71:6.
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39. Davis, C.L., D.A.W. Miller, S.C. Walls, W.J. Barichivich, J.W. Riley, M.E. Brown. 2017. Species interactions and the effects of climate variability on a wetland amphibian metacommunity. Ecological Applications 27:285-296.
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​2016 

38. Muñoz, D.J., K Miller Hesed, E.H.C. Grant, and D.A.W. Miller. 2016. Evaluating within-population variability in behavior and demography for the adaptive potential of a dispersal-limited species to climate change. Ecology and Evolution 6:8740-8755.
37. ​Muñoz, D.J., D.A.W. Miller, C. Sutherland, and E.H.C. Grant. 2016. Using spatial capture-recapture to elucidate population processes and space-use in herpetological studies. Journal of Herpetology 50:570-581.
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36. Knapp, R.A., G.M. Fellers, P.M. Kleeman, D.A.W. Miller, V.T. Vredenburg, E.B. Rosenblum, C.J. Briggs. 2016. Large-scale recovery of an endangered amphibian despite ongoing exposure to multiple stressors. Proceedings of the National Academy of Science 113:11889-11894.

35. Rich, L.N., M. J. Kelly, D.A.W. Miller, J.W. McNutt, and H.S. Robinson. 2016. Occupancy and range extension of the Cape fox in northern Botswana. Canid Biology and Conservation 19:21-24. ​
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34. ​Grant, E. H. C., D. A. W. Miller, B. R. Schmidt, M. J.Adams, S. M. Amburgey, T. Chambert, S. S. Cruickshank, R. N. Fisher, D. M. Green, B. R. Hossack, P. J. Johnson, M. B. Joseph, T. Rittenhouse, M. Ryan, J. H. Waddle, S.C.Walls, L. L. Bailey, G. M. Fellers, T. A. Gorman, A. M. Ray, D. S. Pilliod, S. J. Price, D. Saenz, W. Sadinski, and E. Muths. 2016. Quantitative evidence for the effects of multiple drivers on continental-scale amphibian declines. Scientific Reports 6:25625.
33. Warner, D.A., D.A.W. Miller, A.M. Bronikowski, F.J. Janzen. 2016. Decades of field data reveal that turtles senesce in the wild. Proceedings of the National Academy of Sciences 113:6502-6507. ​​

​32. Rich, L.N., D.A.W. Miller, H.S. Robinson, J.W. McNutt, and M. J. Kelly. 2016. Using camera trapping and hierarchical occupancy modelling to evaluate the spatial ecology of an African mammal community. 
Journal of Applied Ecology ​53:1225-1235. 
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Camera trap picture of a serval in Botswana. Lindsey Rich/Panthera
31. Sutherland, C., D.J. Muñoz, D.A.W. Miller, and E.H.C. Grant. 2016. Spatial-capture recapture: a promising method for analyzing data collected using artificial cover objects. Herpetologica 72:6-12. 
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​​​2015 
30. Miller, D.A.W., and E.H.C. Grant. 2015. Estimating occupancy dynamics for large-scale monitoring networks: amphibian breeding occupancy across protected areas in the northeast U.S. Ecology and Evolution 5:4735-4746.
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Hierarchical study design used in our analysis of the NE refuges.
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Spotted salamander
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Refuge specific estimates of occupancy.
29. Fellers, G.M., P.M. Kleeman, and D.A.W. Miller. 2015. Wetland occupancy of pond-breeding amphibians in Yosemite National Park, USA. Journal of North American Herpetology 2015:22-33.

28. Miller, D.A.W., L.L. Bailey, E.H.C. Grant, B.T. McClintock, L.A. Weir, and T.R. Simons. 2015. Performance of species occurrence estimators when basic assumptions are not met: a test using field data where true occupancy status in known. Methods in Ecology and Evolution 6:557-565.

27. Chambert, T., D.A.W. Miller, and J.D. Nichols. 2015. Modeling false positive detections in species occurrence data under different study designs. Ecology 96:332-339.

2014 

26. Miller, D.A.W., F.J. Janzen, G.M. Fellers, P.M. Kleeman, and A.M. Bronikowski. 2014. Biodemography of ectothermic tetrapods provides insights into the evolution and plasticity of mortality patterns. In Sociality, Hierarchy, Health: Comparative Biodemography (M. Weinstein and M. Lane, Eds). National Academies Press, Washington D.C.
 
25. Jergenson, A.M., D.A.W. Miller, L.A. Neuman-Lee, D.A. Warner, and F.J. Janzen. 2014. Swimming against the tide: resilience of a riverine turtle to recurrent extreme environmental events. Biology Letters 10:20130782.

24. Ausband, D.E., L.N. Rich, E.M. Glenn, M.S. Mitchell, P. Zager, D.A.W. Miller, L.P. Waits, B.B. Ackerman, and C.M. Mack. 2014. Monitoring gray wolf populations using multiple survey methods. Journal of Wildlife Management 78:335-346.

23. Pillay, R., D.A.W. Miller, J.E. Hunes, A.A. Joshi, and M.D. Madhusudan. 2014. Accounting for false positives improves estimates of occupancy from key informant interviews. Diversity and Distributions 20:223-235.

2013 

22. Miller, D.A.W., L. Rich., K. Podruzny, J. Gude, J.D. Nichols, J.E. Hines, and M.S. Mitchell. 2013. Range dynamics of gray wolves in Montana: accounting for false positive errors in multiseason occupancy models. PLoS One  8:E65808.
21. Adams, M.J., D.A.W. Miller, E.Muths, P.S. Corn, E.H. Campbell Grant, L.L. Bailey, G.M. Fellers, R.N. Fisher, W.J. Sandinski, H. Waddle, and S.C. Walls. 2013. Trends in amphibian occupancy in the United States. PLoS One 8:e64347.
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20. Fellers, G.M., P.M. Kleeman, D.A.W. Miller, and B.J. Halstead. 2013. Population size, survival, growth, and movements of the Sierra Nevada yellow-legged frog, Rana Sierrae.  Herpetologica 69:147-162.

2012 ​
19. Miller, D.A.W., C.S. Brehme, J.E. Hines, J.D. Nichols, and R.N. Fisher. 2012. Community ecology of southwest arroyo toads: joint dynamics of toads, predators, and habitat. Journal of Animal Ecology 81:1288-1297.

18. Miller, D.A.W., B.L. Talley, E.H. Campbell Grant, and K.R. Lips. 2012. Accounting for detection in wildlife epidemiological studies: estimating Bd prevalence and infection intensity in amphibians. Methods in Ecology and Evolution 3:850-85
9.
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southwest arroyo toad, USGS
17. Miller, D.A.W., L.A. Weir, B.T. McClintock, E.H. Campbell Grant, L.L. Bailey, and T.R. Simons. 2012. Experimental investigation of false positive errors in auditory species occurrence surveys. Ecological Applications 22:1675-1688.

16. Miller, D.A.W. 2012. General methods for sensitivity analysis of equilibrium dynamics in patch occupancy models. Ecology 93:1204-1213.

2011 

15. Miller, D.A., W.R. Clark, S.J. Arnold, and A.M. Bronikowski. 2011. Stochastic population dynamics in populations of western terrestrial garter snake with divergent life-histories. Ecology 92:1658-1671.

14. Miller, D.A., J.D. Nichols, B.T. McClintock, E.H. Campbell Grant, L.L. Bailey, and L.A. Weir. 2011. Improving estimates of occupancy when two forms of observation error occur: non-detection and species misidentification. Ecology 92:1422-1428.

13. Miller, D.A. 2011. Immediate and delayed effects of poor developmental conditions on growth and flight ability of juvenile mourning doves. Journal of Avian Biology 42:151-158. 

2010 

12. Miller, D.A., and D.L. Otis. 2010. Calibrating recruitment estimates of mourning doves from harvest age ratios. Journal of Wildlife Management 74:1070-1079.

11. Miller, D.A. 2010. Morphological plasticity reduces the effect of poor developmental conditions on fledging age in mourning doves. Proceedings of the Royal Society B  277:1659-1665.

2009 and prior 

10. Miller, D.A., C.M. Vleck, and D.L. Otis. 2009. Individual variation in baseline and stress-induced corticosterone and prolactin predicts reproductive investment by nesting mourning doves. Hormones and Behavior 56:457-464. 

9. Fondell, T.F., J.B. Grand, D.A. Miller, and R.M. Anthony. 2008. Predators of Dusky Canada Goose goslings and the effect of transmitters on gosling survival. Journal of Field Ornithology 79:399-407.

8. Fondell, T.F., D.A. Miller, J.B. Grand, and R.M. Anthony. 2008. Survival of dusky Canada goose goslings in relation to weather and annual nest success. Journal of Wildlife Management 72:1614-1621.

7. Otis, D.L., J.H. Schulz, D.A. Miller, R.E. Mirarchi, and T. S. Baskett. 2008. Mourning Dove (Zenaida macroura). The Birds of North America Online (A. Poole, Ed.). Ithaca: Cornell Lab of Ornithology.  

6. Miller, D.A., J.B. Grand, T.F. Fondell, and R.M. Anthony. 2007. Optimizing nest survival and female survival: consequences of nest site selection for Canada geese. Condor 109:769-780.

5. Anthony, R.M., J.B. Grand, T.F. Fondell, and D.A. Miller. 2006. Techniques for identifying predators of goose nests. Wildlife Biology 12:249-256. 

4. Fondell, T.F., J.B. Grand, D.A. Miller, and R.M. Anthony. 2006. Renesting by dusky Canada geese on the Copper River Delta. Journal of Wildlife Management 70:955-964.

3. Grand, J.B., T.F. Fondell, D.A. Miller, and R.M. Anthony. 2006. Nest survival of dusky Canada geese (Branta canadensis occidentalis): use of discrete time models. Auk 123:198-210.

2. Miller, D.A., J.B. Grand, T.F. Fondell, and R.M. Anthony. 2006. Predator functional response and prey survival: direct and indirect interactions affecting a marked prey population. Journal of Animal Ecology 75:101-110.

1. Hupp, J.W., J.M. Pearce, D.M. Mulcahy, and D.A. Miller. 2006. Effects of abdominally implanted transmitters with percutaneous antennas on migration, reproduction, and survival of Canada geese. Journal of Wildlife Management 70:812-822.


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